RNA-seq of Huh7 cells infected with HCV for 3 days and treated with R... - SRA

SRX23363297: RNA-seq of Huh7 cells infected with HCV for 3 days and treated with RNAseR
1 ILLUMINA (Illumina NovaSeq 6000) run: 39M spots, 11.8G bases, 4.6Gb downloads

Design: Total RNA from infected Huh7 cells was extracted using TRIzol reagent and then treated with RNase R.

Submitted by: Stanford University

Study: Transcriptome of hepatitis C virus (JFH-1 strain)-infected Huh7 cells

PRJNA1068101 • SRP485410 • All experiments • All runs

show Abstracthide Abstract

The cytoplasmic hepatitis C viral RNA genome has been shown to be processed into hundreds of circular RNAs. Some of these circular RNAs contain the viral internal ribosome entry site and are translated to yield novel viral peptides which display proviral functions. Other nontranslated viral circular RNAs also enhance viral RNA abundances, suggesting that they can be targeted in antiviral approaches.

Sample: 3 days post infection_replica 2

SAMN39575509 • SRS20225851 • All experiments • All runs

Organism: Hepacivirus hominis

Library:

Name: infected and RnaseR replica 2

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RT-PCR

Layout: PAIRED

Runs: 1 run, 39M spots, 11.8G bases, 4.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR27696424	39,032,705	11.8G	4.6Gb	2024-01-23

ID:: 31578537

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